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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
204
candidate regulatory elements
146
target gene predictions
140
chromatin state
92
accessible chromatin
68
histone modifications
64
gene expression
48
Fine-mapped variants
43
eQTL
34
binding sites
31
variant allelic effects
4
differential activity
3
caQTL
Date released
334
September, 2022
184
February, 2021
63
March, 2020
44
January, 2020
35
February, 2024
33
May, 2020
31
February, 2020
31
June, 2020
22
January, 2022
18
August, 2021
18
May, 2021
15
November, 2021
9
August, 2017
7
October, 2022
6
April, 2019
5
May, 2019
5
November, 2019
4
March, 2023
3
February, 2023
3
September, 2023
2
May, 2022
2
October, 2019
1
July, 2020
1
March, 2024
1
September, 2018
Available data
583
bed bed3+
126
bed bed9
124
tsv
66
bigWig
17
bigBed bed9
3
csv
1
bam
Organism
876
Homo sapiens
Biosample type
621
tissue
129
primary cell
114
cell line
12
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
862
AMP
15
ENCODE
Genome assembly (visualization)
776
hg19
305
GRCh38
2
hg18
organ_slims!
mammary gland
thyroid gland
BIOSAMPLE
TYPE
877 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
Fine-mapped variants
eQTL
binding sites
variant allelic effects
differential activity
caQTL
tissue
heart
37
20
21
5
1
3
1
2
brain
29
16
18
2
3
1
2
1
1
liver
13
10
9
4
2
1
7
1
1
1
heart left ventricle
11
7
8
3
1
1
1
2
caudate nucleus
5
3
4
2
1
1
3
2
1
+ See 72 more…
primary cell
hepatocyte
1
3
1
8
4
13
1
2
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of cardiac tissue
3
4
3
2
hepatic stellate cell
1
1
1
3
1
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 18 more…
cell line
HepG2
2
3
2
2
5
3
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 15 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
+ See 1 more…
stem cell
undifferentiated ESC (H9 cell line)
1
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