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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
16
total RNA-seq
9
DNase-seq
4
small RNA-seq
2
pCHi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
38
DNA binding
20
Transcription
11
DNA accessibility
Target of assay
37
histone
37
histone modification
33
narrow histone mark
4
broad histone mark
1
control
Date released
32
October, 2019
12
February, 2020
9
July, 2019
9
June, 2019
6
October, 2017
2
March, 2020
1
February, 2023
Available data
49
bam
49
bigWig
41
bed narrowPeak
37
tagAlign
22
tsv
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
1
bed bed3
1
tagAlign bed3+
Organism
71
Homo sapiens
Biosample type
71
tissue
Organ
138
pancreas
81
epithelium
71
brain
57
connective tissue
25
heart
19
kidney
17
adipose tissue
16
liver
9
musculature of body
8
bone element
8
skeleton
7
blood vessel
7
vasculature
4
artery
3
eye
3
limb
2
blood
2
bodily fluid
2
embryo
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
nerve
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
71
AMP
Genome assembly (visualization)
49
GRCh38
47
hg19
Lab
71
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
total RNA-seq
DNase-seq
small RNA-seq
pCHi-C
ATAC-seq
FAIRE-seq
tissue
brain
6
2
1
frontal cortex
2
2
1
1
cerebellum (Hemisphere)
1
1
1
1
Ammon's horn
1
1
angular gyrus
2
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