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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 38ChIP-seq
  • 16total RNA-seq
  • 9DNase-seq
  • 4small RNA-seq
  • 2pCHi-C
  • 1ATAC-seq
  • 1FAIRE-seq
Assay category
  • 38DNA binding
  • 20Transcription
  • 11DNA accessibility
Target of assay
  • 37histone
  • 37histone modification
  • 33narrow histone mark
  • 4broad histone mark
  • 1control
Date released
  • 32October, 2019
  • 12February, 2020
  • 9July, 2019
  • 9June, 2019
  • 6October, 2017
  • 2March, 2020
  • 1February, 2023
Available data
  • 49bam
  • 49bigWig
  • 41bed narrowPeak
  • 37tagAlign
  • 22tsv
  • 10bigBed narrowPeak
  • 9bed bed3+
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 1bed bed3
  • 1tagAlign bed3+
Organism
  • 71Homo sapiens
Biosample type
  • 71tissue
Organ
  • 138pancreas
  • 81epithelium
  • 71brain
  • 57connective tissue
  • 25heart
  • 19kidney
  • 17adipose tissue
  • 16liver
  • 9musculature of body
  • 8bone element
  • 8skeleton
  • 7blood vessel
  • 7vasculature
  • 4artery
  • 3eye
  • 3limb
  • 2blood
  • 2bodily fluid
  • 2embryo
  • 2intestine
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1nerve
  • 1ovary
  • 1pericardium
  • 1pituitary gland
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
  • 1vein
Project
  • 71AMP
Genome assembly (visualization)
  • 49GRCh38
  • 47hg19
Lab
  • 71AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

71 results

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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
small RNA-seq
pCHi-C
ATAC-seq
FAIRE-seq
tissue
brain621
frontal cortex2211
cerebellum (Hemisphere)1111
Ammon's horn11
angular gyrus2
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