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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
5
DNase-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
1
total RNA-seq
Assay category
11
DNA binding
5
DNA accessibility
4
Transcription
3
3D chromatin structure
2
DNA methylation
Target of assay
8
histone
8
histone modification
5
narrow histone mark
3
RNA binding protein
3
broad histone mark
3
control
3
transcription factor
Date released
8
July, 2019
6
November, 2017
6
October, 2019
5
June, 2019
Available data
23
bigWig
20
bam
16
bed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
11
bigBed narrowPeak
8
bed bed3+
6
fastq
4
tsv
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
Organism
25
Homo sapiens
Biosample type
17
primary cell
8
tissue
Organ
410
liver
88
epithelium
63
pancreas
56
blood
56
bodily fluid
42
vasculature
39
kidney
37
blood vessel
25
brain
18
vein
16
heart
13
musculature of body
11
connective tissue
11
embryo
7
artery
5
limb
4
eye
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
1
thymus
Project
25
AMP
Genome assembly (visualization)
24
hg19
20
GRCh38
Lab
25
AMP-T2D consortium
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
DNase-seq
Hi-C
single cell RNA-seq
RRBS
total RNA-seq
primary cell
astrocyte of the cerebellum
2
1
1
brain microvascular endothelial cell
2
1
1
choroid plexus epithelial cell
2
1
1
cerebellar granule cell
2
Purkinje cell
1
+ See 2 more…
tissue
brain
5
1
1
middle frontal gyrus
1
See all biosamples
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