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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 169ChIP-seq
  • 18DNase-seq
  • 3ATAC-seq
Assay category
  • 169DNA binding
  • 21DNA accessibility
Target of assay
  • 142histone
  • 142histone modification
  • 79narrow histone mark
  • 63broad histone mark
  • 27control
Date released
  • 85November, 2017
  • 48October, 2019
  • 28May, 2019
  • 16June, 2019
  • 10October, 2017
  • 2November, 2018
  • 1July, 2019
Available data
  • 174bam
  • 150bigWig
  • 146bed narrowPeak
  • 106bigBed narrowPeak
  • 81tagAlign
  • 27bed broadPeak
  • 18bed bed3+
  • 18bigBed broadPeak
  • 15fastq
Organism
  • 190Homo sapiens
Biosample type
  • 186tissue
  • 4primary cell
Organ
  • 745pancreas
  • 616connective tissue
  • 474adipose tissue
  • 365liver
  • 355epithelium
  • 352heart
  • 296kidney
  • 190brain
  • 187vasculature
  • 186blood vessel
  • 150bone element
  • 130artery
  • 114limb
  • 74musculature of body
  • 54eye
  • 42nerve
  • 24embryo
  • 24spleen
  • 19lung
  • 18ureter
  • 11blood
  • 11bodily fluid
  • 8skeleton
  • 4gonad
  • 4ovary
  • 3vein
  • 1lymph node
  • 1pituitary gland
  • 1skin of body
Project
  • 190AMP
Genome assembly (visualization)
  • 148GRCh38
  • 93hg19
Lab
  • 190AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 4missing controlled_by
BIOSAMPLE
ASSAY

190 results

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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
tissue
layer of hippocampus22
brain912
caudate nucleus151
substantia nigra15
temporal lobe15
primary cell
astrocyte of the cerebellum1
brain microvascular endothelial cell1
brain pericyte1
choroid plexus epithelial cell1
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