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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 343target gene predictions
  • 153accessible chromatin
  • 111candidate regulatory elements
  • 72chromatin state
  • 36Fine-mapped variants
  • 29eQTL
  • 19gene expression
  • 18differential activity
  • 18variant allelic effects
  • 6binding sites
Date released
  • 418July, 2026
  • 180September, 2022
  • 52February, 2021
  • 38March, 2020
  • 19May, 2020
  • 18February, 2020
  • 18May, 2026
  • 17January, 2022
  • 11January, 2020
  • 11May, 2021
  • 6August, 2017
  • 6October, 2022
  • 4May, 2019
  • 3September, 2023
  • 1February, 2024
  • 1February, 2025
  • 1March, 2024
  • 1November, 2019
Available data
  • 646bed bed3+
  • 67tsv
  • 66bed bed9
  • 6bigBed bed9
  • 2bigWig
Organism
  • 804Homo sapiens
Collection Tags
  • 249ENCODE-rE2G
  • 180EpiMap
  • 133CATlas
  • 62ENCODE
  • 61GTEx
  • 36HDMA
  • 33DGA
  • 18pyxis
  • 17T1D
  • 17T2D
  • 17eQTLCatalogue
  • 4AMP
Biosample type
  • 500tissue
  • 222primary cell
  • 71cell line
  • 11in vitro differentiated cells
  • 1stem cell
Organ
  • 3303blood
  • 2845vasculature
  • 2818blood vessel
  • 2789bodily fluid
  • 2655vein
  • 805brain
  • 698kidney
  • 681epithelium
  • 451heart
  • 419lung
  • 387connective tissue
  • 342musculature of body
  • 324intestine
  • 256skin of body
  • 246pancreas
  • 220limb
  • 206large intestine
  • 191liver
  • 180embryo
  • 158extraembryonic component
  • 132adipose tissue
  • 131stomach
  • 111muscle organ
  • 95adrenal gland
  • 94eye
  • 94small intestine
  • 89thymus
  • 88placenta
  • 85uterus
  • 83mammary gland
  • 78bone element
  • 69ureter
  • 67artery
  • 67prostate gland
  • 60__MARKER__
  • 60spleen
  • 56gonad
  • 51penis
  • 46spinal cord
  • 45thyroid gland
  • 44esophagus
  • 40lymph node
  • 30ovary
  • 26testis
  • 22nerve
  • 21lymphoid tissue
  • 20mouth
  • 16skeleton
  • 15lymphatic vessel
  • 14breast
  • 12pituitary gland
  • 12urinary bladder
  • 12vagina
  • 11bronchus
  • 11tongue
  • 7bone marrow
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 805AMP
Genome assembly (visualization)
  • 551GRCh38
  • 325hg19
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

805 results

search-icontable-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
chromatin state
Fine-mapped variants
eQTL
gene expression
differential activity
variant allelic effects
binding sites
tissue
head of caudate nucleus86
brain302918211
dorsolateral prefrontal cortex5711
posterior cingulate gyrus48
caudate nucleus4543211
primary cell
glutamatergic neuron815
GABAergic neuron22
astrocyte182
medium spiny neuron8
neuron8
cell line
SK-N-SH5421
SK-N-DZ442
pituitary stalk10
SK-N-MC2211
A172221
in vitro differentiated cells
brain2
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
astrocyte1
bipolar neuron1
stem cell
undifferentiated ESC (H9 cell line)1
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