Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
target gene predictions
85
accessible chromatin
81
candidate regulatory elements
51
gene expression
48
chromatin state
28
binding sites
24
histone modifications
23
eQTL
14
differential activity
14
variant allelic effects
6
Fine-mapped variants
2
pQTL
1
caQTL
Date released
120
September, 2022
108
February, 2021
50
November, 2021
27
May, 2021
20
June, 2020
18
February, 2024
17
September, 2023
11
August, 2021
10
October, 2022
9
February, 2020
9
March, 2020
8
January, 2022
8
May, 2020
7
August, 2017
7
January, 2020
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
332
bed bed3+
67
tsv
52
bigWig
41
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
466
Homo sapiens
Biosample type
264
primary cell
111
tissue
49
in vitro differentiated cells
41
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
390
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
390
hg19
120
GRCh38
2
hg18
organ_slims!
embryo
vasculature
BIOSAMPLE
TYPE
466 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
gene expression
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
10
1
1
osteoblast
2
5
2
2
1
3
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
2
1
6
1
4
2
+ See 41 more…
tissue
adipose tissue
8
2
7
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
2
2
5
2
2
2
3
breast epithelium
3
1
5
2
subcutaneous abdominal adipose tissue
5
1
+ See 11 more…
in vitro differentiated cells
adipocyte
6
4
4
1
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
pituitary stalk
10
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download