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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
106
target gene predictions
100
candidate regulatory elements
45
chromatin state
25
accessible chromatin
25
binding sites
15
histone modifications
13
gene expression
4
eQTL
2
variant allelic effects
Date released
132
September, 2022
93
February, 2021
53
February, 2024
21
June, 2020
9
May, 2021
8
August, 2021
6
November, 2021
4
January, 2022
3
March, 2024
3
October, 2022
2
March, 2020
1
August, 2017
Available data
274
bed bed3+
44
bed bed9
13
tsv
4
bigWig
Organism
335
Homo sapiens
Biosample type
189
cell line
83
tissue
32
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
329
AMP
6
ENCODE
Genome assembly (visualization)
318
hg19
105
GRCh38
BIOSAMPLE
TYPE
335 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
cell line
H1-hESC
39
1
1
1
2
1
8
H9
8
7
1
GM12864
1
2
1
1
2
1
GM12865
1
2
1
1
2
1
MM.1S
2
2
1
1
1
1
+ See 29 more…
tissue
chorionic villus
4
8
4
breast epithelium
3
5
2
1
esophagus muscularis mucosa
2
5
2
1
1
esophagus squamous epithelium
2
6
2
1
trophoblast
3
4
2
1
1
+ See 10 more…
primary cell
trophoblast cell
5
7
4
1
1
epithelial cell of esophagus
1
2
1
2
smooth muscle cell of the esophagus
2
2
primordial germ cell
1
1
placental hematopoietic stem cell
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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