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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
64
candidate regulatory elements
41
target gene predictions
35
chromatin state
17
binding sites
14
accessible chromatin
7
histone modifications
4
gene expression
3
Fine-mapped variants
3
eQTL
2
variant allelic effects
Date released
93
September, 2022
52
February, 2021
10
June, 2020
6
November, 2021
5
May, 2021
5
October, 2022
4
March, 2020
3
January, 2020
3
March, 2024
2
August, 2017
2
February, 2024
2
January, 2022
2
May, 2020
1
February, 2020
Available data
146
bed bed3+
33
bed bed9
8
tsv
4
bigWig
2
bigBed bed9
Organism
190
Homo sapiens
Biosample type
70
primary cell
70
tissue
47
cell line
3
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
184
AMP
6
ENCODE
Genome assembly (visualization)
183
hg19
47
GRCh38
BIOSAMPLE
TYPE
190 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
Fine-mapped variants
eQTL
variant allelic effects
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
+ See 2 more…
tissue
spinal cord
14
8
7
1
1
Peyer's patch
7
3
3
1
breast epithelium
5
3
2
1
C1 segment of cervical spinal cord
1
3
1
germinal center
1
1
1
+ See 5 more…
cell line
MCF-7
9
6
5
3
1
2
T47D
3
2
2
GM18507
1
2
1
1
1
MCF 10A
3
spinal cord
2
1
+ See 1 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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