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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
227
candidate regulatory elements
141
target gene predictions
122
chromatin state
70
accessible chromatin
42
gene expression
32
binding sites
21
variant allelic effects
19
histone modifications
18
differential activity
12
eQTL
9
Fine-mapped variants
3
caQTL
Date released
326
September, 2022
162
February, 2021
36
November, 2021
35
September, 2023
26
February, 2024
22
June, 2020
16
January, 2020
15
March, 2020
15
May, 2020
11
May, 2021
9
January, 2022
7
March, 2024
6
August, 2017
6
October, 2022
5
February, 2020
4
April, 2020
4
February, 2023
4
March, 2023
3
November, 2019
2
October, 2019
1
August, 2021
1
May, 2019
Available data
517
bed bed3+
116
bed bed9
70
tsv
49
bigWig
8
bigBed bed9
2
txt
Organism
716
Homo sapiens
Biosample type
442
tissue
220
primary cell
52
cell line
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
641
AMP
36
ENCODE
35
KPMP
4
LungMap
Genome assembly (visualization)
642
hg19
209
GRCh38
BIOSAMPLE
TYPE
716 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
variant allelic effects
histone modifications
differential activity
eQTL
Fine-mapped variants
caQTL
tissue
stomach
40
21
19
3
1
1
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
coronary artery
3
3
3
3
1
2
2
3
1
+ See 31 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
bronchial epithelial cell
4
2
2
1
2
1
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 43 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
HCT-116 cell
1
1
2
+ See 9 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
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