Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 4candidate regulatory elements
  • 3accessible chromatin
  • 2binding sites
  • 2chromatin state
  • 2target gene predictions
  • 1histone modifications
  • 1variant allelic effects
Date released
  • 6September, 2022
  • 5February, 2021
  • 1April, 2020
  • 1February, 2024
  • 1June, 2020
  • 1November, 2021
Available data
  • 13bed bed3+
  • 2bed bed9
  • 2bigWig
Organism
  • 15Homo sapiens
Collection Tags
  • 6EpiMap
  • 4ChIP-Atlas
  • 2ENCODE
  • 1AMP
  • 1DGA
  • 1T2DKP
Biosample type
  • 15primary cell
Organ
  • 2909vasculature
  • 2855bodily fluid
  • 2845blood vessel
  • 2844blood
  • 2657vein
  • 899epithelium
  • 652kidney
  • 456brain
  • 449connective tissue
  • 371musculature of body
  • 304lung
  • 275intestine
  • 263pancreas
  • 250heart
  • 241limb
  • 210embryo
  • 194skin of body
  • 166large intestine
  • 159liver
  • 143extraembryonic component
  • 113stomach
  • 109eye
  • 96adipose tissue
  • 89bone element
  • 82mammary gland
  • 81small intestine
  • 80uterus
  • 77artery
  • 76prostate gland
  • 72placenta
  • 67adrenal gland
  • 64ureter
  • 63penis
  • 61lymph node
  • 48gonad
  • 48thymus
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 23lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 13AMP
  • 1ENCODE
  • 1LungMap
Genome assembly (visualization)
  • 15hg19
  • 3GRCh38
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

15 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
target gene predictions
histone modifications
variant allelic effects
primary cell
bronchial epithelial cell412221
club cell2
bronchial goblet cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego