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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
160
target gene predictions
141
candidate regulatory elements
96
accessible chromatin
74
chromatin state
59
gene expression
41
binding sites
34
histone modifications
21
eQTL
14
differential activity
14
variant allelic effects
6
Fine-mapped variants
2
pQTL
1
caQTL
Date released
195
September, 2022
157
February, 2021
69
February, 2024
52
November, 2021
29
June, 2020
23
May, 2021
19
August, 2021
17
September, 2023
11
October, 2022
10
March, 2020
10
May, 2024
9
February, 2020
8
August, 2017
8
May, 2020
7
January, 2020
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
498
bed bed3+
75
tsv
66
bed bed9
54
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
663
Homo sapiens
Biosample type
294
primary cell
158
cell line
130
tissue
79
in vitro differentiated cells
2
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
585
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
581
hg19
204
GRCh38
2
hg18
organ_slims!
stomach
vasculature
BIOSAMPLE
TYPE
663 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
4
3
16
1
2
6
pericyte cell
10
3
10
1
trophoblast cell
5
7
1
4
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
4
6
4
2
+ See 45 more…
cell line
H1-hESC
39
1
1
1
8
2
1
H9
8
7
1
GM23248
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 26 more…
tissue
adipose tissue
8
7
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
chorionic villus
4
8
4
trophoblast
3
4
1
2
1
+ See 12 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
chondrocyte
5
+ See 15 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
See all biosamples
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