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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
165
target gene predictions
152
candidate regulatory elements
104
accessible chromatin
78
chromatin state
61
gene expression
46
binding sites
36
histone modifications
21
eQTL
16
differential activity
16
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
207
September, 2022
166
February, 2021
69
February, 2024
55
November, 2021
31
June, 2020
23
May, 2021
22
September, 2023
18
August, 2021
13
May, 2024
13
October, 2022
10
January, 2020
10
March, 2020
10
May, 2020
9
February, 2020
8
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
4
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
532
bed bed3+
79
tsv
70
bed bed9
60
bigWig
6
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
705
Homo sapiens
Biosample type
332
primary cell
160
cell line
130
tissue
81
in vitro differentiated cells
2
stem cell
Organ
959
epithelium
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
618
AMP
55
ENCODE
20
KPMP
4
ITG
4
LungMap
2
T1D
2
community
Genome assembly (visualization)
618
hg19
218
GRCh38
2
hg18
organ_slims!
kidney
BIOSAMPLE
TYPE
705 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
3
16
1
2
6
pericyte cell
10
3
10
1
trophoblast cell
5
7
1
4
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
4
6
4
2
+ See 51 more…
cell line
H1-hESC
39
1
1
1
8
2
1
H9
8
7
1
GM23248
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 27 more…
tissue
adipose tissue
8
7
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
chorionic villus
4
8
4
trophoblast
3
4
1
2
1
+ See 12 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
chondrocyte
5
+ See 16 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
See all biosamples
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