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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
127
candidate regulatory elements
101
target gene predictions
96
accessible chromatin
68
chromatin state
53
gene expression
36
binding sites
26
eQTL
26
histone modifications
19
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
171
September, 2022
135
February, 2021
54
November, 2021
25
June, 2020
20
February, 2024
18
May, 2021
17
September, 2023
14
March, 2020
14
October, 2022
13
January, 2020
12
May, 2020
11
August, 2021
10
February, 2020
10
January, 2022
10
May, 2024
8
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
417
bed bed3+
73
tsv
60
bed bed9
58
bigWig
7
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
579
Homo sapiens
Biosample type
325
primary cell
167
tissue
50
in vitro differentiated cells
36
cell line
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
499
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
497
hg19
162
GRCh38
2
hg18
BIOSAMPLE
TYPE
579 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
eQTL
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
+ See 48 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
spinal cord
14
8
1
7
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
esophagus muscularis mucosa
5
2
1
2
1
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
spinal cord
1
2
+ See 9 more…
stem cell
mesenchymal stem cell
1
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