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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
163
candidate regulatory elements
131
target gene predictions
98
accessible chromatin
93
chromatin state
50
gene expression
33
binding sites
30
histone modifications
23
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
255
September, 2022
154
February, 2021
54
November, 2021
26
June, 2020
21
May, 2021
18
February, 2024
17
September, 2023
12
October, 2022
11
August, 2021
11
March, 2020
11
May, 2020
10
January, 2020
9
February, 2020
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
483
bed bed3+
86
bed bed9
66
tsv
59
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
661
Homo sapiens
Biosample type
309
primary cell
262
tissue
55
in vitro differentiated cells
34
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
581
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
585
hg19
173
GRCh38
2
hg18
organ_slims!
small intestine
BIOSAMPLE
TYPE
661 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
trophoblast cell
7
5
1
4
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
+ See 51 more…
tissue
placenta
26
15
1
14
1
2
1
thymus
20
14
1
11
1
1
adipose tissue
7
8
2
6
3
1
4
1
ovary
8
6
1
4
1
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
+ See 14 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
trophoblast cell
2
2
1
fibroblast
1
1
+ See 9 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
HTR-8/Svneo
1
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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