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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
147
accessible chromatin
91
candidate regulatory elements
83
target gene predictions
53
chromatin state
50
gene expression
35
binding sites
29
histone modifications
22
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
138
September, 2022
122
February, 2021
54
November, 2021
29
November, 2022
26
June, 2020
25
February, 2023
19
February, 2024
17
September, 2023
15
May, 2021
12
January, 2020
12
May, 2020
12
October, 2022
11
August, 2021
11
February, 2020
9
March, 2020
7
March, 2023
6
August, 2017
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
414
bed bed3+
91
bigWig
67
tsv
47
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
552
Homo sapiens
Biosample type
286
primary cell
165
tissue
60
in vitro differentiated cells
40
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
trachea
4
nose
1
pericardium
Project
472
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
477
hg19
135
GRCh38
2
hg18
organ_slims!
lung
trachea
BIOSAMPLE
TYPE
552 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
1
2
3
2
foreskin fibroblast
1
6
2
1
4
2
fibroblast of cardiac tissue
2
3
4
3
+ See 48 more…
tissue
retina
23
6
3
3
1
1
1
1
1
adipose tissue
2
7
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
pigmented layer of retina
20
omental fat pad
2
5
2
2
2
2
3
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
olfactory neurosphere cell line
1
1
1
1
+ See 10 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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