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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
145
accessible chromatin
108
candidate regulatory elements
89
target gene predictions
57
chromatin state
51
gene expression
35
binding sites
28
histone modifications
23
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
147
September, 2022
126
February, 2021
54
November, 2021
29
November, 2022
25
February, 2023
24
June, 2020
19
February, 2024
17
May, 2021
17
September, 2023
13
October, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2020
10
March, 2020
10
May, 2024
7
August, 2017
7
January, 2022
7
March, 2023
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
Available data
435
bed bed3+
91
bigWig
68
tsv
50
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
578
Homo sapiens
Biosample type
295
primary cell
186
tissue
56
in vitro differentiated cells
40
cell line
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
498
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
501
hg19
147
GRCh38
2
hg18
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
578 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
3
4
1
2
6
pericyte cell
10
3
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 45 more…
tissue
retina
23
6
3
3
1
1
1
1
1
adipose tissue
2
7
8
6
3
1
4
1
ovary
1
8
6
4
1
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
pigmented layer of retina
20
+ See 11 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
fibroblast
1
1
+ See 9 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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