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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
206
ChIP-seq
Assay category
206
DNA binding
Target of assay
206
histone
206
histone modification
121
broad histone mark
84
narrow histone mark
59
control
56
transcription factor
20
RNA binding protein
2
chromatin remodeller
Date released
88
August, 2017
42
April, 2019
35
May, 2024
19
May, 2019
16
June, 2019
6
October, 2019
Available data
157
bed narrowPeak
157
bigWig
107
bam
77
bigBed narrowPeak
32
tagAlign
26
fastq
14
bed broadPeak
Organism
206
Homo sapiens
Biosample type
153
tissue
37
in vitro differentiated cells
16
primary cell
Organ
187
brain
151
pancreas
102
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
206
AMP
Genome assembly (visualization)
141
GRCh38
122
hg19
Lab
171
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
15
inconsistent ontology term
BIOSAMPLE
ASSAY
206 results
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ChIP-seq
tissue
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
skeletal muscle tissue
19
heart
12
+ See 7 more…
in vitro differentiated cells
adipocyte
37
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
2
skeletal muscle cell
1
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