Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
264
candidate regulatory elements
252
gene expression
165
target gene predictions
141
accessible chromatin
134
chromatin state
70
differential activity
38
binding sites
32
histone modifications
32
variant allelic effects
26
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
372
September, 2022
306
February, 2021
157
September, 2023
53
November, 2021
38
August, 2021
38
June, 2020
29
May, 2020
24
January, 2020
20
February, 2024
18
February, 2020
17
May, 2021
14
October, 2022
13
March, 2020
10
May, 2024
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
4
March, 2024
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
680
bed bed3+
317
tsv
127
bed bed9
93
txt
91
bigWig
4
bigBed bed9
1
bigBed narrowPeak
Organism
1164
Homo sapiens
Biosample type
599
primary cell
435
tissue
78
cell line
51
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
945
AMP
155
KPMP
53
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
824
hg19
246
GRCh38
2
hg18
BIOSAMPLE
TYPE
1164 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
6
2
pericyte cell
3
10
10
1
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
osteoblast
2
2
2
5
1
3
2
+ See 111 more…
tissue
kidney
29
7
14
10
16
1
2
1
1
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
left kidney
18
9
9
+ See 30 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
GM18507
1
2
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 20 more…
in vitro differentiated cells
adipocyte
4
1
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download