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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
candidate regulatory elements
250
gene expression
158
target gene predictions
136
accessible chromatin
128
chromatin state
70
differential activity
37
binding sites
31
variant allelic effects
29
histone modifications
26
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
354
September, 2022
297
February, 2021
157
September, 2023
52
November, 2021
38
August, 2021
35
June, 2020
28
May, 2020
23
January, 2020
19
February, 2024
18
February, 2020
17
May, 2021
14
October, 2022
13
March, 2020
9
May, 2024
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
653
bed bed3+
315
tsv
121
bed bed9
93
txt
89
bigWig
4
bigBed bed9
1
bigBed narrowPeak
Organism
1128
Homo sapiens
Biosample type
589
primary cell
417
tissue
70
cell line
51
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
910
AMP
155
KPMP
52
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
791
hg19
236
GRCh38
2
hg18
organ_slims!
liver
BIOSAMPLE
TYPE
1128 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
6
2
pericyte cell
3
10
10
1
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
osteoblast
2
2
2
5
1
3
2
+ See 110 more…
tissue
kidney
29
7
14
10
16
1
1
2
1
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
left kidney
18
9
9
+ See 27 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 18 more…
in vitro differentiated cells
adipocyte
4
1
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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