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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
282
gene expression
258
candidate regulatory elements
197
accessible chromatin
193
target gene predictions
139
chromatin state
89
differential activity
42
variant allelic effects
41
binding sites
40
eQTL
36
histone modifications
11
Fine-mapped variants
2
pQTL
2
sQTL
2
variant to gene
1
caQTL
Date released
380
September, 2022
324
February, 2021
137
September, 2023
71
November, 2021
47
March, 2023
47
May, 2021
46
August, 2021
42
February, 2024
38
June, 2020
34
May, 2020
27
January, 2020
21
March, 2020
20
February, 2020
20
January, 2021
13
October, 2022
11
January, 2022
10
August, 2017
8
October, 2019
7
August, 2018
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
April, 2019
2
January, 2018
2
March, 2024
2
May, 2024
2
November, 2019
2
September, 2018
1
February, 2023
1
June, 2021
1
May, 2019
Available data
779
bed bed3+
362
tsv
143
bigWig
128
bed bed9
93
txt
14
bigBed narrowPeak
6
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1335
Homo sapiens
Biosample type
666
primary cell
508
tissue
106
cell line
54
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1098
AMP
135
KPMP
71
ENCODE
20
T1D
4
ITG
4
community
3
LungMap
Genome assembly (visualization)
939
hg19
281
GRCh38
2
hg18
organ_slims!
blood vessel
breast
BIOSAMPLE
TYPE
1335 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
eQTL
histone modifications
Fine-mapped variants
pQTL
sQTL
variant to gene
caQTL
primary cell
fibroblast
16
4
6
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
pericyte cell
1
10
10
1
glomerular endothelial cell
14
2
2
1
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
+ See 117 more…
tissue
kidney
7
29
10
14
16
1
1
1
2
islet of Langerhans
11
6
1
3
1
2
13
1
2
2
2
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
+ See 36 more…
cell line
EndoC_BH1
8
8
1
3
1
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 25 more…
in vitro differentiated cells
adipocyte
1
4
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
pancreatic ductal cell
3
fibroblast
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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