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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
153
candidate regulatory elements
126
target gene predictions
100
accessible chromatin
87
chromatin state
52
gene expression
37
binding sites
30
histone modifications
23
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
227
September, 2022
156
February, 2021
56
November, 2021
29
June, 2020
21
February, 2024
21
May, 2021
17
September, 2023
13
October, 2022
11
August, 2021
11
March, 2020
10
August, 2017
10
January, 2020
10
May, 2020
9
February, 2020
8
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
477
bed bed3+
77
bed bed9
68
tsv
58
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
648
Homo sapiens
Biosample type
289
primary cell
239
tissue
65
cell line
54
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
trachea
4
nose
1
pericardium
Project
566
AMP
56
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
570
hg19
168
GRCh38
2
hg18
organ_slims!
trachea
BIOSAMPLE
TYPE
648 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 45 more…
tissue
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
3
1
4
1
sigmoid colon
10
7
1
5
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
transverse colon
8
5
1
4
1
+ See 21 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
olfactory neurosphere cell line
1
1
1
1
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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