Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
107
candidate regulatory elements
95
accessible chromatin
94
target gene predictions
62
chromatin state
51
gene expression
36
binding sites
33
histone modifications
29
eQTL
16
variant allelic effects
15
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
157
September, 2022
125
February, 2021
50
November, 2021
23
June, 2020
19
February, 2024
18
August, 2021
18
May, 2021
17
September, 2023
15
March, 2020
13
October, 2022
11
February, 2020
11
January, 2020
10
August, 2017
10
May, 2020
10
May, 2024
7
January, 2022
7
March, 2023
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
396
bed bed3+
72
tsv
58
bigWig
52
bed bed9
7
txt
3
bigBed bed9
1
bam
1
bigBed narrowPeak
Organism
552
Homo sapiens
Biosample type
291
primary cell
153
tissue
57
cell line
50
in vitro differentiated cells
1
stem cell
Organ
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
476
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
473
hg19
153
GRCh38
4
hg18
organ_slims!
epithelium
thyroid gland
BIOSAMPLE
TYPE
552 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
16
4
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
5
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
+ See 44 more…
tissue
liver
13
4
10
9
1
1
2
7
1
1
adipose tissue
7
2
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
right lobe of liver
2
1
1
1
1
3
+ See 8 more…
cell line
HepG2
2
2
3
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download