Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
124
candidate regulatory elements
111
accessible chromatin
105
target gene predictions
69
chromatin state
69
gene expression
44
binding sites
37
histone modifications
30
eQTL
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
178
September, 2022
136
February, 2021
54
November, 2021
47
February, 2024
25
June, 2020
21
August, 2021
20
March, 2020
20
May, 2021
17
September, 2023
13
October, 2022
12
January, 2020
12
May, 2020
11
February, 2020
11
March, 2023
11
May, 2024
10
August, 2017
8
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
November, 2019
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
Available data
455
bed bed3+
89
tsv
77
bigWig
59
bed bed9
7
txt
3
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
640
Homo sapiens
Biosample type
342
primary cell
183
tissue
57
cell line
57
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
560
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
539
hg19
195
GRCh38
4
hg18
organ_slims!
bone element
BIOSAMPLE
TYPE
640 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
2
8
3
1
13
1
4
2
fibroblast
3
16
4
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
5
2
1
2
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 47 more…
tissue
liver
13
4
10
9
1
1
2
7
1
1
spleen
15
2
8
6
1
1
1
adipose tissue
7
2
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
+ See 8 more…
cell line
HepG2
2
2
3
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download