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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
191
candidate regulatory elements
140
target gene predictions
139
accessible chromatin
108
chromatin state
103
gene expression
55
binding sites
44
histone modifications
35
eQTL
35
variant allelic effects
33
differential activity
18
Fine-mapped variants
5
caQTL
2
pQTL
Date released
271
September, 2022
194
February, 2021
58
November, 2021
52
September, 2023
50
February, 2024
31
March, 2020
30
June, 2020
28
January, 2020
28
May, 2020
22
August, 2021
22
May, 2021
16
February, 2020
15
October, 2022
14
May, 2024
11
August, 2017
11
March, 2023
10
January, 2022
7
November, 2022
6
April, 2020
5
May, 2022
4
February, 2023
4
November, 2019
4
October, 2019
3
November, 2020
3
September, 2018
2
January, 2021
1
August, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
May, 2019
Available data
620
bed bed3+
148
tsv
101
bigWig
97
bed bed9
11
bigBed bed9
9
txt
3
csv
1
bam
1
bigBed narrowPeak
Organism
908
Homo sapiens
Biosample type
479
primary cell
301
tissue
68
cell line
59
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
786
AMP
58
ENCODE
50
KPMP
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
752
hg19
272
GRCh38
4
hg18
organ_slims!
uterus
BIOSAMPLE
TYPE
908 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
2
3
8
1
13
1
4
2
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
2
3
2
+ See 74 more…
tissue
liver
13
10
4
9
1
1
2
7
1
1
renal pelvis
19
9
2
9
1
adipose tissue
7
8
2
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
+ See 20 more…
cell line
HepG2
2
3
2
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 14 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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