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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
130
candidate regulatory elements
105
target gene predictions
96
accessible chromatin
70
chromatin state
50
gene expression
43
binding sites
29
histone modifications
23
eQTL
17
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
183
September, 2022
143
February, 2021
56
November, 2021
25
June, 2020
19
February, 2024
19
May, 2021
17
September, 2023
15
October, 2022
12
March, 2020
11
August, 2021
11
January, 2020
10
February, 2020
10
May, 2020
10
May, 2024
8
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
433
bed bed3+
70
tsv
62
bed bed9
58
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
590
Homo sapiens
Biosample type
333
primary cell
133
tissue
70
cell line
53
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
508
AMP
56
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
515
hg19
162
GRCh38
2
hg18
organ_slims!
vein
BIOSAMPLE
TYPE
590 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 49 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
spinal cord
14
8
1
7
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 9 more…
cell line
MCF-7
9
6
1
5
3
2
GM23248
2
1
1
1
1
1
T47D
3
2
2
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 11 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
mammary gland epithelial cell
1
1
1
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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