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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
Assay category
46
DNA binding
Target of assay
111
histone
111
histone modification
64
broad histone mark
46
narrow histone mark
41
control
40
transcription factor
10
RNA binding protein
2
chromatin remodeller
Date released
35
August, 2017
8
June, 2019
2
May, 2019
1
October, 2019
Available data
29
bed narrowPeak
29
bigWig
23
bam
13
fastq
12
tagAlign
11
bigBed narrowPeak
6
bed broadPeak
Organism
46
Homo sapiens
Biosample type
22
tissue
16
in vitro differentiated cells
8
primary cell
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
46
AMP
Genome assembly (visualization)
29
hg19
22
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
organ_slims!
gonad
stomach
BIOSAMPLE
ASSAY
46 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
11
skeletal muscle tissue
7
muscle of leg
2
adipose tissue
1
islet of Langerhans
1
in vitro differentiated cells
adipocyte
16
primary cell
skeletal muscle satellite cell
3
cardiac fibroblast
2
mesenchymal stem cell
2
skeletal muscle cell
1
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