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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
127
candidate regulatory elements
102
target gene predictions
90
accessible chromatin
70
chromatin state
51
gene expression
28
binding sites
24
eQTL
24
histone modifications
16
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
pQTL
1
caQTL
Date released
180
September, 2022
126
February, 2021
54
November, 2021
21
June, 2020
18
February, 2024
17
May, 2021
17
September, 2023
13
March, 2020
12
February, 2020
11
August, 2021
11
May, 2020
10
May, 2024
10
October, 2022
8
August, 2017
8
January, 2020
8
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
November, 2019
Available data
399
bed bed3+
71
tsv
62
bed bed9
56
bigWig
7
txt
3
bigBed bed9
1
bigBed narrowPeak
Organism
558
Homo sapiens
Biosample type
276
primary cell
200
tissue
50
in vitro differentiated cells
31
cell line
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
478
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
482
hg19
159
GRCh38
2
hg18
organ_slims!
vasculature
BIOSAMPLE
TYPE
558 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
eQTL
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 43 more…
tissue
small intestine
29
17
1
15
1
adipose tissue
7
8
2
6
3
1
4
1
tibial nerve
6
3
3
4
2
2
2
3
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
+ See 10 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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