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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
110
candidate regulatory elements
91
target gene predictions
87
accessible chromatin
59
chromatin state
50
gene expression
36
binding sites
31
histone modifications
22
eQTL
14
differential activity
14
variant allelic effects
6
Fine-mapped variants
2
pQTL
1
caQTL
Date released
153
September, 2022
133
February, 2021
50
November, 2021
23
June, 2020
19
February, 2024
18
May, 2021
17
September, 2023
11
August, 2021
10
May, 2024
10
October, 2022
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
May, 2020
7
November, 2022
6
January, 2020
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
Available data
380
bed bed3+
66
tsv
52
bed bed9
51
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
523
Homo sapiens
Biosample type
279
primary cell
110
tissue
83
cell line
50
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
447
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
449
hg19
137
GRCh38
2
hg18
organ_slims!
brain
vasculature
BIOSAMPLE
TYPE
523 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 42 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
prostate gland
4
2
1
2
2
2
1
subcutaneous abdominal adipose tissue
5
1
+ See 8 more…
cell line
22Rv1
4
2
2
1
1
GM23248
2
1
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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