Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 88candidate regulatory elements
  • 78target gene predictions
  • 49gene expression
  • 48chromatin state
  • 21eQTL
  • 16variant allelic effects
  • 12differential activity
  • 11binding sites
  • 6Fine-mapped variants
  • 3accessible chromatin
  • 3caQTL
  • 2pQTL
  • 2sQTL
Date released
  • 120September, 2022
  • 63February, 2021
  • 18November, 2021
  • 17September, 2023
  • 16May, 2021
  • 12October, 2022
  • 11August, 2021
  • 10February, 2024
  • 10May, 2020
  • 10May, 2024
  • 9February, 2020
  • 9March, 2020
  • 7August, 2017
  • 7March, 2023
  • 6January, 2022
  • 3April, 2020
  • 2January, 2025
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1January, 2020
  • 1January, 2021
  • 1July, 2025
  • 1November, 2020
  • 1October, 2019
Available data
  • 217bed bed3+
  • 64tsv
  • 41bed bed9
  • 7txt
  • 3bigWig
  • 2bigBed bed9
  • 2csv
Organism
  • 339Homo sapiens
Collection Tags
  • 120EpiMap
  • 63DGA
  • 58ENCODE
  • 36 T2DKP
  • 34AMP
  • 28T2DKP
  • 15KPMP
  • 10GTEx
  • 8T1D
  • 7HPAP
  • 6FNIH_projects-heart
  • 6T2D
  • 6eQTLCatalogue
  • 2FNIH_projects-liver
  • 1BLUEPRINT
  • 1CMDGA
Biosample type
  • 213primary cell
  • 83tissue
  • 31in vitro differentiated cells
  • 11cell line
  • 1stem cell
Organ
  • 2848vasculature
  • 2797blood vessel
  • 2789bodily fluid
  • 2780blood
  • 2654vein
  • 690epithelium
  • 594kidney
  • 369brain
  • 342musculature of body
  • 339connective tissue
  • 290lung
  • 255intestine
  • 222heart
  • 220limb
  • 204pancreas
  • 180embryo
  • 164skin of body
  • 154large intestine
  • 130extraembryonic component
  • 110stomach
  • 108liver
  • 81small intestine
  • 77adipose tissue
  • 75uterus
  • 66adrenal gland
  • 66mammary gland
  • 64placenta
  • 61bone element
  • 60ureter
  • 58prostate gland
  • 54artery
  • 51penis
  • 45thymus
  • 42eye
  • 42gonad
  • 41esophagus
  • 40lymph node
  • 40spinal cord
  • 31spleen
  • 22nerve
  • 21lymphoid tissue
  • 21ovary
  • 21testis
  • 21thyroid gland
  • 18lymphatic vessel
  • 18mouth
  • 12breast
  • 12pituitary gland
  • 11bronchus
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 7bone marrow
  • 3nose
  • 1pericardium
Project
  • 294AMP
  • 18ENCODE
  • 15KPMP
  • 4ITG
  • 4community
  • 3LungMap
  • 1T1D
Genome assembly (visualization)
  • 265hg19
  • 82GRCh38
  • 2hg18
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

339 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
eQTL
variant allelic effects
differential activity
binding sites
Fine-mapped variants
accessible chromatin
caQTL
pQTL
sQTL
primary cell
fibroblast34261
fibroblast of lung6442
pericyte cell31011
fibroblast of dermis4431
foreskin fibroblast6212
tissue
adipose tissue783641
subcutaneous adipose tissue251613
omental fat pad522223
subcutaneous abdominal adipose tissue51
bone tissue4
in vitro differentiated cells
adipocyte4616
mesenchymal stem cell332
Adipose SGBS cell line (adipocyte)1
Human Mesenchymal Cell derived Adipocytes1
Human Mesenchymal Cell derived Osteoblasts1
cell line
GM23248211
HT1080211
foreskin fibroblast111
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego