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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
268
gene expression
252
target gene predictions
247
candidate regulatory elements
238
accessible chromatin
128
chromatin state
92
differential activity
58
binding sites
49
variant allelic effects
41
histone modifications
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
361
September, 2022
300
February, 2021
155
September, 2023
129
November, 2021
127
February, 2024
44
May, 2021
41
June, 2020
38
March, 2023
31
August, 2021
25
May, 2020
21
January, 2020
20
January, 2021
16
March, 2020
15
February, 2020
15
November, 2022
12
February, 2023
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
August, 2017
3
March, 2024
3
November, 2019
2
January, 2022
2
May, 2019
2
May, 2022
1
July, 2020
Available data
887
bed bed3+
351
tsv
186
bigWig
124
bed bed9
78
txt
14
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1392
Homo sapiens
Biosample type
842
primary cell
316
tissue
177
cell line
56
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1079
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1026
hg19
383
GRCh38
organ_slims!
skeleton
spinal cord
BIOSAMPLE
TYPE
1392 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
7
15
2
2
1
1
2
hepatocyte
13
3
1
8
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
1
2
2
1
1
endothelial cell of umbilical vein
4
6
2
5
2
1
+ See 151 more…
tissue
muscle of arm
16
33
1
16
1
muscle of leg
14
27
2
15
tibial nerve
2
3
6
3
4
2
3
2
pigmented layer of retina
20
tibial artery
1
2
3
3
3
2
3
2
+ See 35 more…
cell line
H1-hESC
8
39
1
1
1
2
1
EndoC_BH1
8
1
8
3
1
H9
8
7
1
GM23248
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
+ See 26 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 12 more…
stem cell
H1-hESC
1
See all biosamples
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