Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
107
target gene predictions
95
candidate regulatory elements
73
accessible chromatin
48
chromatin state
20
binding sites
16
histone modifications
11
gene expression
2
variant allelic effects
1
eQTL
Date released
141
September, 2022
81
February, 2021
52
February, 2024
24
February, 2023
22
November, 2022
17
June, 2020
8
August, 2021
8
May, 2021
7
November, 2021
3
May, 2020
3
October, 2022
2
February, 2020
2
January, 2020
2
March, 2020
1
August, 2017
Available data
314
bed bed3+
47
bed bed9
39
bigWig
12
tsv
Organism
373
Homo sapiens
Biosample type
153
tissue
137
cell line
46
primary cell
36
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
366
AMP
7
ENCODE
Genome assembly (visualization)
361
hg19
108
GRCh38
organ_slims!
ovary
penis
BIOSAMPLE
TYPE
373 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
histone modifications
gene expression
variant allelic effects
eQTL
tissue
thymus
14
20
1
11
1
1
retina
3
6
23
3
1
1
1
1
1
pigmented layer of retina
20
chorionic villus
4
8
4
trophoblast
3
4
1
2
1
+ See 6 more…
cell line
H1-hESC
39
1
1
1
2
1
8
H9
8
7
1
WERI-Rb-1
1
2
1
1
2
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 17 more…
primary cell
trophoblast cell
5
7
1
4
1
retinal pigment epithelial cell
1
2
3
1
2
1
iris pigment epithelial cell
1
2
1
1
fibroblast of the conjunctiva
1
2
1
Muller cell
2
+ See 6 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
Download