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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
157
candidate regulatory elements
157
target gene predictions
98
chromatin state
63
accessible chromatin
56
gene expression
31
binding sites
31
histone modifications
14
eQTL
14
variant allelic effects
12
Fine-mapped variants
4
differential activity
3
caQTL
Date released
241
September, 2022
128
February, 2021
85
February, 2024
27
March, 2020
26
August, 2021
21
June, 2020
17
November, 2021
15
January, 2020
14
May, 2020
14
May, 2021
13
February, 2020
6
April, 2019
4
August, 2017
4
January, 2022
4
March, 2023
4
May, 2024
4
November, 2019
3
February, 2023
2
May, 2022
2
October, 2019
2
October, 2022
1
July, 2020
1
March, 2024
1
May, 2019
1
September, 2018
Available data
463
bed bed3+
89
bed bed9
68
tsv
47
bigWig
11
bigBed bed9
3
csv
1
bam
Organism
640
Homo sapiens
Biosample type
317
tissue
164
cell line
120
primary cell
38
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
623
AMP
17
ENCODE
Genome assembly (visualization)
571
hg19
239
GRCh38
2
hg18
BIOSAMPLE
TYPE
640 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
tissue
heart
37
20
21
5
3
1
1
2
liver
13
10
9
4
1
1
2
7
1
1
heart left ventricle
11
7
8
3
1
1
1
2
coronary artery
3
3
3
3
1
2
2
3
1
heart right ventricle
6
5
5
1
1
1
+ See 20 more…
cell line
H1-hESC
1
39
1
1
8
2
1
HepG2
2
3
2
2
3
5
H9
7
8
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 20 more…
primary cell
hepatocyte
2
3
1
8
13
1
4
2
trophoblast cell
7
5
4
1
1
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of cardiac tissue
3
4
3
2
hepatic stellate cell
2
1
1
3
1
1
1
+ See 14 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
hepatocyte
2
1
1
+ See 6 more…
stem cell
H1-hESC
1
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