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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
147
candidate regulatory elements
137
target gene predictions
72
chromatin state
31
binding sites
29
accessible chromatin
20
histone modifications
12
gene expression
2
eQTL
Date released
203
September, 2022
126
February, 2021
54
February, 2024
25
June, 2020
13
May, 2021
8
August, 2021
7
November, 2021
4
August, 2017
4
October, 2022
2
January, 2022
2
March, 2020
2
March, 2024
Available data
368
bed bed3+
68
bed bed9
12
tsv
4
bigWig
Organism
450
Homo sapiens
Biosample type
223
cell line
169
tissue
30
in vitro differentiated cells
27
primary cell
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
443
AMP
7
ENCODE
Genome assembly (visualization)
436
hg19
130
GRCh38
organ_slims!
blood
placenta
BIOSAMPLE
TYPE
450 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
cell line
H1-hESC
1
39
1
2
1
1
8
H9
7
8
1
GM12864
2
1
1
2
1
1
GM12865
2
1
1
2
1
1
HT-29
2
2
1
1
1
1
+ See 37 more…
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
chorionic villus
8
4
4
trophoblast
4
3
2
1
1
+ See 13 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
7
5
4
1
1
colon epithelial cell
3
3
primordial germ cell
1
1
trophoblast giant cell
1
stem cell
H1-hESC
1
See all biosamples
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