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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
195
candidate regulatory elements
189
target gene predictions
106
chromatin state
97
accessible chromatin
63
gene expression
33
differential activity
21
eQTL
20
binding sites
19
variant allelic effects
18
histone modifications
14
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
293
September, 2022
151
February, 2021
76
February, 2024
47
March, 2023
42
May, 2021
22
November, 2021
20
January, 2021
20
June, 2020
20
March, 2020
16
August, 2021
16
May, 2020
11
January, 2020
8
February, 2020
7
August, 2018
7
January, 2022
6
October, 2019
5
August, 2017
4
November, 2019
2
May, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
544
bed bed3+
103
tsv
100
bed bed9
73
bigWig
14
bigBed narrowPeak
6
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
779
Homo sapiens
Biosample type
449
tissue
168
cell line
133
primary cell
28
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
735
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
670
hg19
232
GRCh38
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
779 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
muscle of arm
33
16
16
1
1
small intestine
29
17
15
1
1
muscle of leg
27
14
15
2
islet of Langerhans
1
3
6
11
13
2
1
1
2
2
2
tibial nerve
6
3
4
3
2
2
2
3
+ See 37 more…
cell line
H1-hESC
1
39
1
1
8
2
1
EndoC_BH1
1
8
8
3
1
H9
7
8
1
GM23248
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
+ See 21 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 16 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
pancreatic ductal cell
3
+ See 3 more…
stem cell
H1-hESC
1
See all biosamples
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