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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
218
candidate regulatory elements
180
target gene predictions
116
chromatin state
31
accessible chromatin
25
binding sites
18
histone modifications
11
gene expression
2
eQTL
1
variant allelic effects
Date released
342
September, 2022
141
February, 2021
52
February, 2024
19
June, 2020
12
May, 2021
12
November, 2021
8
August, 2021
6
October, 2022
3
April, 2020
2
August, 2017
2
January, 2022
2
March, 2020
1
March, 2024
Available data
475
bed bed3+
114
bed bed9
12
bigWig
11
tsv
Organism
602
Homo sapiens
Biosample type
276
tissue
226
cell line
65
primary cell
34
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
587
AMP
12
ENCODE
3
LungMap
Genome assembly (visualization)
589
hg19
179
GRCh38
BIOSAMPLE
TYPE
602 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
lung
33
17
16
1
1
placenta
26
15
14
1
1
2
1
left lung
26
13
13
right lung
22
11
11
1
chorionic villus
8
4
4
+ See 6 more…
cell line
A549
21
19
18
1
2
1
H1-hESC
1
39
1
1
2
1
8
H9
7
8
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
+ See 23 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of lung
6
4
4
2
fibroblast of villous mesenchyme
2
1
1
1
2
1
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
1
1
+ See 7 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
olfactory neurosphere cell line
1
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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