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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
114
candidate regulatory elements
113
target gene predictions
54
chromatin state
30
binding sites
27
accessible chromatin
19
histone modifications
14
gene expression
2
differential activity
1
eQTL
Date released
159
September, 2022
103
February, 2021
51
February, 2024
21
June, 2020
9
May, 2021
8
August, 2021
6
November, 2021
5
September, 2023
4
October, 2022
3
May, 2024
1
April, 2020
1
August, 2017
1
February, 2020
1
January, 2022
1
March, 2020
Available data
304
bed bed3+
53
bed bed9
15
tsv
6
bigWig
Organism
374
Homo sapiens
Biosample type
194
cell line
95
tissue
52
primary cell
32
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
362
AMP
6
ENCODE
5
KPMP
1
LungMap
Genome assembly (visualization)
357
hg19
114
GRCh38
BIOSAMPLE
TYPE
374 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
differential activity
eQTL
cell line
H1-hESC
1
39
1
2
1
1
8
H9
7
8
1
GM12864
2
1
1
2
1
1
GM12865
2
1
1
2
1
1
MM.1S
2
2
1
1
1
1
+ See 31 more…
tissue
placenta
26
15
14
1
1
2
1
chorionic villus
8
4
4
trophoblast
4
3
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
+ See 2 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of villous mesenchyme
2
1
1
2
1
1
endothelial cell of lymphatic vessel
3
1
3
dermis lymphatic vessel endothelial cell
2
2
2
Lymphatic Endothelial Cell
3
2
+ See 6 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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