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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
target gene predictions
73
candidate regulatory elements
35
chromatin state
18
accessible chromatin
15
binding sites
14
gene expression
13
histone modifications
2
differential activity
Date released
102
September, 2022
63
February, 2021
52
February, 2024
13
June, 2020
8
August, 2021
7
May, 2021
5
November, 2021
5
September, 2023
3
May, 2024
1
April, 2020
1
August, 2017
1
March, 2020
1
March, 2024
1
October, 2022
Available data
213
bed bed3+
34
bed bed9
16
tsv
5
bigWig
Organism
263
Homo sapiens
Biosample type
135
cell line
53
tissue
42
primary cell
32
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
252
AMP
5
ENCODE
5
KPMP
1
LungMap
Genome assembly (visualization)
247
hg19
94
GRCh38
organ_slims!
stomach
tongue
BIOSAMPLE
TYPE
263 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
differential activity
cell line
H1-hESC
39
1
1
1
2
8
1
H9
8
7
1
GM18507
2
1
1
1
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 16 more…
tissue
chorionic villus
4
8
4
Peyer's patch
3
7
3
1
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
germinal center
1
1
1
+ See 4 more…
primary cell
trophoblast cell
5
7
4
1
1
endothelial cell of lymphatic vessel
1
3
3
dermis lymphatic vessel endothelial cell
2
2
2
Lymphatic Endothelial Cell
3
2
dermis microvascular lymphatic vessel endothelial cell
2
+ See 3 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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