Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
182
target gene predictions
168
candidate regulatory elements
116
accessible chromatin
98
chromatin state
94
gene expression
51
differential activity
39
binding sites
26
variant allelic effects
25
histone modifications
22
eQTL
14
Fine-mapped variants
3
caQTL
2
sQTL
2
variant to gene
Date released
257
September, 2022
151
February, 2021
93
February, 2024
51
March, 2023
44
May, 2021
35
September, 2023
30
November, 2021
23
March, 2020
21
June, 2020
21
May, 2020
20
January, 2020
20
January, 2021
17
August, 2021
8
January, 2022
8
October, 2019
7
August, 2018
7
February, 2020
6
August, 2017
5
February, 2023
5
November, 2019
5
October, 2022
3
April, 2020
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
564
bed bed3+
150
tsv
92
bigWig
91
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
txt
Organism
842
Homo sapiens
Biosample type
321
primary cell
313
tissue
172
cell line
35
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
752
AMP
35
KPMP
30
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
678
hg19
252
GRCh38
BIOSAMPLE
TYPE
842 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
4
6
2
5
2
1
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
trophoblast cell
5
7
1
4
1
pancreatic alpha cell
3
7
3
3
1
+ See 50 more…
tissue
small intestine
17
29
1
15
1
islet of Langerhans
1
6
3
11
2
1
1
13
2
2
2
body of pancreas
5
8
4
2
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
3
3
1
2
2
3
1
+ See 24 more…
cell line
H1-hESC
39
1
1
1
8
2
1
EndoC_BH1
1
8
8
3
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 24 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 5 more…
stem cell
H1-hESC
1
See all biosamples
Download