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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
91
target gene predictions
68
candidate regulatory elements
34
chromatin state
14
accessible chromatin
13
binding sites
13
gene expression
11
histone modifications
1
eQTL
Date released
99
September, 2022
58
February, 2021
51
February, 2024
12
June, 2020
8
August, 2021
7
May, 2021
2
March, 2020
2
March, 2024
2
November, 2021
1
August, 2017
1
February, 2020
1
January, 2022
1
October, 2022
Available data
198
bed bed3+
33
bed bed9
12
tsv
2
bigWig
Organism
245
Homo sapiens
Biosample type
131
cell line
56
tissue
30
in vitro differentiated cells
27
primary cell
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
243
AMP
2
ENCODE
Genome assembly (visualization)
231
hg19
87
GRCh38
BIOSAMPLE
TYPE
245 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
cell line
H1-hESC
39
1
1
1
2
8
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 15 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
tongue
2
4
2
1
urinary bladder
2
3
2
1
embryonic facial prominence
1
1
1
1
+ See 6 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
5
7
4
1
1
fibroblast of gingiva
1
2
1
primordial germ cell
1
1
pericardium fibroblast
1
placental hematopoietic stem cell
1
+ See 1 more…
stem cell
H1-hESC
1
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