Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
209
candidate regulatory elements
167
target gene predictions
106
chromatin state
41
accessible chromatin
23
gene expression
20
binding sites
18
histone modifications
9
Fine-mapped variants
9
eQTL
9
variant allelic effects
2
caQTL
1
differential activity
Date released
294
September, 2022
148
February, 2021
66
February, 2024
17
June, 2020
13
March, 2020
13
May, 2021
12
November, 2021
9
August, 2021
9
February, 2020
8
May, 2020
6
January, 2020
4
August, 2017
4
October, 2022
3
May, 2022
2
January, 2022
2
March, 2024
2
May, 2019
1
November, 2019
1
October, 2019
Available data
472
bed bed3+
102
bed bed9
30
tsv
19
bigWig
4
bigBed bed9
Organism
614
Homo sapiens
Biosample type
366
tissue
144
cell line
71
primary cell
32
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
602
AMP
12
ENCODE
Genome assembly (visualization)
593
hg19
186
GRCh38
organ_slims!
lung
placenta
BIOSAMPLE
TYPE
614 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
Fine-mapped variants
eQTL
variant allelic effects
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
tibial nerve
6
3
4
3
2
3
2
2
psoas muscle
7
8
4
1
+ See 25 more…
cell line
H1-hESC
1
39
1
1
8
2
1
H9
7
8
1
LHCN-M2
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 17 more…
primary cell
trophoblast cell
7
5
4
1
1
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 7 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
Download