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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
133
candidate regulatory elements
129
target gene predictions
67
chromatin state
33
accessible chromatin
21
gene expression
20
binding sites
18
histone modifications
6
eQTL
3
Fine-mapped variants
3
variant allelic effects
2
caQTL
1
differential activity
Date released
186
September, 2022
108
February, 2021
66
February, 2024
14
June, 2020
13
November, 2021
11
May, 2021
9
August, 2021
7
March, 2020
5
February, 2020
4
August, 2017
4
October, 2022
3
May, 2022
2
March, 2024
1
January, 2020
1
January, 2022
1
May, 2020
1
October, 2019
Available data
344
bed bed3+
63
bed bed9
19
tsv
14
bigWig
1
bigBed bed9
Organism
436
Homo sapiens
Biosample type
186
tissue
144
cell line
73
primary cell
32
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
423
AMP
13
ENCODE
Genome assembly (visualization)
418
hg19
133
GRCh38
organ_slims!
limb
skeleton
BIOSAMPLE
TYPE
436 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
caQTL
differential activity
tissue
muscle of back
28
13
13
psoas muscle
7
8
4
1
muscle of trunk
8
5
4
chorionic villus
8
4
4
skeletal muscle tissue
6
3
3
1
1
2
+ See 16 more…
cell line
H1-hESC
1
39
1
1
8
2
1
H9
7
8
1
LHCN-M2
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 17 more…
primary cell
trophoblast cell
7
5
4
1
1
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 9 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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