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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
219
candidate regulatory elements
173
target gene predictions
110
chromatin state
41
accessible chromatin
22
binding sites
22
gene expression
18
histone modifications
9
Fine-mapped variants
9
eQTL
7
variant allelic effects
2
caQTL
1
differential activity
Date released
309
September, 2022
154
February, 2021
66
February, 2024
18
June, 2020
14
May, 2021
13
March, 2020
13
November, 2021
9
August, 2021
7
February, 2020
6
January, 2020
5
May, 2020
5
October, 2022
4
August, 2017
3
May, 2022
2
January, 2022
2
March, 2024
2
May, 2019
1
October, 2019
Available data
488
bed bed3+
106
bed bed9
29
tsv
18
bigWig
3
bigBed bed9
Organism
633
Homo sapiens
Biosample type
377
tissue
147
cell line
76
primary cell
32
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
tongue
10
urinary bladder
vagina
5
trachea
4
nose
1
pericardium
Project
620
AMP
13
ENCODE
Genome assembly (visualization)
613
hg19
189
GRCh38
organ_slims!
tongue
vagina
BIOSAMPLE
TYPE
633 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
Fine-mapped variants
eQTL
variant allelic effects
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
spinal cord
14
8
7
1
1
psoas muscle
7
8
4
1
+ See 26 more…
cell line
H1-hESC
1
39
1
1
2
8
1
H9
7
8
1
LHCN-M2
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 18 more…
primary cell
trophoblast cell
7
5
4
1
1
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 9 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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