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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
101
target gene predictions
86
candidate regulatory elements
44
chromatin state
16
binding sites
15
accessible chromatin
14
histone modifications
10
gene expression
1
eQTL
Date released
129
September, 2022
71
February, 2021
51
February, 2024
12
June, 2020
8
August, 2021
8
May, 2021
3
November, 2021
2
October, 2022
1
August, 2017
1
January, 2022
1
March, 2020
Available data
233
bed bed3+
43
bed bed9
10
tsv
3
bigWig
Organism
287
Homo sapiens
Biosample type
130
cell line
95
tissue
31
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
284
AMP
3
ENCODE
Genome assembly (visualization)
276
hg19
98
GRCh38
organ_slims!
artery
liver
BIOSAMPLE
TYPE
287 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
cell line
H1-hESC
39
1
1
2
1
1
8
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 15 more…
tissue
placenta
15
26
14
1
1
2
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
+ See 2 more…
primary cell
trophoblast cell
5
7
4
1
1
fibroblast of villous mesenchyme
1
2
1
2
1
1
primordial germ cell
1
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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