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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
121
target gene predictions
114
candidate regulatory elements
57
chromatin state
25
binding sites
23
accessible chromatin
20
histone modifications
12
gene expression
3
eQTL
1
variant allelic effects
Date released
165
September, 2022
101
February, 2021
52
February, 2024
16
June, 2020
12
November, 2021
11
May, 2021
8
August, 2021
3
January, 2022
3
October, 2022
2
August, 2017
2
March, 2024
1
March, 2020
Available data
306
bed bed3+
55
bed bed9
12
tsv
7
bigWig
Organism
376
Homo sapiens
Biosample type
194
cell line
87
primary cell
58
tissue
36
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
364
AMP
12
ENCODE
Genome assembly (visualization)
361
hg19
121
GRCh38
organ_slims!
penis
vein
BIOSAMPLE
TYPE
376 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
cell line
H1-hESC
39
1
1
2
1
1
8
H9
8
7
1
GM23248
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 33 more…
primary cell
trophoblast cell
5
7
4
1
1
keratinocyte
5
3
3
1
2
2
1
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
2
6
2
skin fibroblast
3
2
2
2
+ See 10 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
lower leg skin
2
6
2
skin of body
1
1
1
3
embryonic facial prominence
1
1
1
1
+ See 7 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 6 more…
stem cell
H1-hESC
1
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