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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
114
target gene predictions
108
candidate regulatory elements
52
chromatin state
20
accessible chromatin
13
binding sites
12
gene expression
12
histone modifications
2
variant allelic effects
1
eQTL
Date released
150
September, 2022
82
February, 2021
53
February, 2024
13
June, 2020
11
November, 2021
9
May, 2021
8
August, 2021
2
August, 2017
2
March, 2020
2
March, 2024
1
January, 2022
1
October, 2022
Available data
271
bed bed3+
50
bed bed9
12
tsv
7
bigWig
Organism
334
Homo sapiens
Biosample type
143
tissue
127
cell line
33
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
spleen
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
vagina
5
trachea
4
nose
1
pericardium
Project
323
AMP
11
ENCODE
Genome assembly (visualization)
321
hg19
113
GRCh38
organ_slims!
spleen
testis
vagina
BIOSAMPLE
TYPE
334 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
variant allelic effects
eQTL
tissue
stomach
21
40
19
3
1
1
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
stomach smooth muscle
2
4
3
gastroesophageal sphincter
1
5
1
+ See 7 more…
cell line
H1-hESC
39
1
1
1
2
8
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 14 more…
primary cell
trophoblast cell
5
7
4
1
1
parietal cell
1
1
1
peptic cell
1
1
1
foveolar cell of stomach
1
1
primordial germ cell
1
1
+ See 4 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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