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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
6
total RNA-seq
1
GRO-seq
Assay category
19
DNA binding
6
Transcription
Target of assay
10
histone
10
histone modification
7
narrow histone mark
6
control
3
broad histone mark
3
transcription factor
Date released
13
February, 2018
10
December, 2017
2
May, 2021
1
January, 2018
Available data
25
bam
24
fastq
19
bigWig
12
bed narrowPeak
6
tsv
Organism
26
Homo sapiens
Biosample type
26
in vitro differentiated cells
Organ
883
pancreas
673
connective tissue
491
adipose tissue
436
epithelium
381
liver
377
heart
315
kidney
261
brain
194
vasculature
193
blood vessel
158
bone element
134
artery
117
limb
83
musculature of body
57
eye
43
nerve
26
embryo
25
spleen
20
lung
18
ureter
16
skeleton
13
blood
13
bodily fluid
5
gonad
5
ovary
4
vein
2
intestine
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
1
hg18
Lab
26
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
replication_type!
isogenic
BIOSAMPLE
ASSAY
26 results
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Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
15
4
1
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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