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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
3
ChIP-seq
Assay category
10
Transcription
3
DNA binding
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Date released
8
August, 2021
3
December, 2017
2
May, 2021
Available data
13
bam
12
bigWig
10
tsv
3
bed bed3+
3
fastq
2
bed narrowPeak
Organism
13
Homo sapiens
Biosample type
8
cell line
5
in vitro differentiated cells
Organ
426
liver
201
pancreas
169
epithelium
96
brain
68
connective tissue
58
blood
58
bodily fluid
58
kidney
49
vasculature
44
blood vessel
41
heart
22
musculature of body
19
vein
17
adipose tissue
13
embryo
11
artery
9
bone element
8
limb
8
skeleton
7
eye
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
pituitary gland
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
13
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
13
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent control read length
replication_type!
unreplicated
BIOSAMPLE
ASSAY
13 results
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total RNA-seq
ChIP-seq
cell line
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
3
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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