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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19ChIP-seq
  • 4total RNA-seq
  • 1GRO-seq
Assay category
  • 19DNA binding
  • 4Transcription
Target of assay
  • 10histone
  • 10histone modification
  • 7narrow histone mark
  • 6control
  • 3broad histone mark
  • 3transcription factor
Date released
  • 13February, 2018
  • 10December, 2017
  • 1January, 2018
Available data
  • 24fastq
  • 23bam
  • 17bigWig
  • 12bed narrowPeak
  • 4tsv
Organism
  • 24Homo sapiens
Biosample type
  • 24in vitro differentiated cells
Organ
  • 745pancreas
  • 616connective tissue
  • 474adipose tissue
  • 365liver
  • 355epithelium
  • 352heart
  • 296kidney
  • 190brain
  • 187vasculature
  • 186blood vessel
  • 150bone element
  • 130artery
  • 114limb
  • 74musculature of body
  • 54eye
  • 42nerve
  • 24embryo
  • 24spleen
  • 19lung
  • 18ureter
  • 11blood
  • 11bodily fluid
  • 8skeleton
  • 4gonad
  • 4ovary
  • 3vein
  • 1lymph node
  • 1pituitary gland
  • 1skin of body
Project
  • 24AMP
Genome assembly (visualization)
  • 16GRCh38
  • 16hg19
  • 1hg18
Lab
  • 24AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 1missing controlled_by
Audit category:
  • 2inconsistent control read length
BIOSAMPLE
ASSAY

24 results

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Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm1541
Hepatic endoderm4
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