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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
36
DNA binding
Target of assay
78
histone
78
histone modification
42
narrow histone mark
36
broad histone mark
28
control
7
transcription factor
6
RNA binding protein
3
nucleotide modification
0
chromatin remodeller
Date released
12
October, 2019
10
September, 2018
6
August, 2017
6
November, 2019
2
May, 2019
Available data
36
bam
34
bigWig
32
bed narrowPeak
16
fastq
7
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
Organism
36
Homo sapiens
Biosample type
30
primary cell
6
cell line
Organ
78
pancreas
70
brain
liver
57
heart
46
connective tissue
45
blood vessel
45
epithelium
45
vasculature
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
10
blood
10
bodily fluid
9
vein
4
embryo
4
spleen
Project
36
AMP
Genome assembly (visualization)
34
hg19
32
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
10
missing controlled_by
organ_slims!
liver
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
pancreatic acinar cell
4
epithelial cell of proximal tubule
3
pancreatic alpha cell
3
+ See 2 more…
cell line
EndoC_BH1
6
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