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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
193
accessible chromatin
129
target gene predictions
120
candidate regulatory elements
83
gene expression
56
chromatin state
46
binding sites
38
differential activity
34
variant allelic effects
31
histone modifications
4
eQTL
2
caQTL
Date released
160
September, 2022
134
February, 2021
129
November, 2021
75
February, 2024
38
March, 2023
35
May, 2021
21
June, 2020
20
January, 2021
20
September, 2023
15
November, 2022
12
February, 2023
10
May, 2024
8
May, 2020
7
April, 2020
7
August, 2021
7
March, 2020
7
October, 2022
6
August, 2018
6
January, 2020
5
October, 2019
3
August, 2017
3
January, 2022
3
March, 2024
2
May, 2022
1
February, 2020
1
July, 2020
1
November, 2019
Available data
556
bed bed3+
161
bigWig
107
tsv
53
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
2
bigBed bed9
Organism
736
Homo sapiens
Biosample type
554
primary cell
79
tissue
77
cell line
26
in vitro differentiated cells
Organ
959
epithelium
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
558
AMP
129
ENCODE
20
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
611
hg19
244
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
736 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
7
3
9
2
2
1
1
2
hepatocyte
8
3
2
13
1
1
2
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
pancreatic ductal cell
6
3
3
1
3
1
2
+ See 88 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus muscularis mucosa
1
2
5
2
1
esophagus squamous epithelium
1
2
6
2
esophagus
3
4
2
1
+ See 14 more…
cell line
MCF-7
1
6
9
5
3
2
EndoC_BH1
8
1
8
3
1
T47D
2
3
2
keratinocyte
3
1
MCF 10A
3
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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